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PASS Bio-NEXUS-0.69b i686-linux-thread-multi-64int-ld 2.6.24-16-generic
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From:
DAGOLDEN
Date:
June 7, 2008 09:45
Subject:
PASS Bio-NEXUS-0.69b i686-linux-thread-multi-64int-ld 2.6.24-16-generic
This distribution has been tested as part of the cpan-testers
effort to test as many new uploads to CPAN as possible. See
http://testers.cpan.org/
--
Dear Thomas Hladish,
This is a computer-generated report for Bio-NEXUS-0.69b
on perl 5.8.8 patch 33819, created by CPAN-Reporter-1.15.
Thank you for uploading your work to CPAN. Congratulations!
All tests were successful.
Sections of this report:
* Tester comments
* Program output
* Prerequisites
* Environment and other context
------------------------------
TESTER COMMENTS
------------------------------
Additional comments from tester:
this report is from an automated smoke testing program
and was not reviewed by a human for accuracy
------------------------------
PROGRAM OUTPUT
------------------------------
Output from './Build test':
t/_perl_module-loading....................ok
t/_perl_perlpod...........................ok
t/_perl_podcoverage.......................ok
t/assumptionsblock_options................ok
t/assumptionsblock_wtset-scores...........ok
t/block_link-and-title....................ok
t/charactersblock_methods-01..............ok
t/charactersblock_methods-02..............ok
t/matrix_character-state-frequency........ok
t/matrix_charactersblock-interleave.......ok
t/matrix_historyblock-probab-distrib......ok
t/matrix_polymorphic-and-uncertain........ok
t/nexus_add-otu-clone.....................skipped: Test::Deep not found
t/nexus_block-level-commands..............ok
t/nexus_taxa-labels-quoted................ok
t/nexus_taxa-labels-squarebrackets........ok
t/nexus_taxa-labels.......................ok
t/nexus_wrong_format......................ok
t/nhxcmd_parsing..........................ok
t/notesblock_methods......................skipped: The notes block implementation is not complete
t/tree_equals.............................ok
t/tree_methods-01.........................ok
t/tree_methods-02.........................ok
t/tree_parsing............................ok
t/tree_support-values.....................ok
t/treesblock_methods......................ok
t/uncat_clone_methods.....................skipped: Clone::PP not installed
t/uncat_datablock_clustalw................ok
t/uncat_equals_methods....................ok
t/uncat_excessive_whitespace..............ok
t/uncat_ntax-nchar-dimensions.............ok
t/uncat_object-file-equality..............ok
t/uncat_shared-commands...................ok
t/uncat_todo..............................ok
t/uncat_write.............................ok
All tests successful.
Test Summary Report
-------------------
t/nexus_wrong_format.t (Wstat: 0 Tests: 1 Failed: 0)
TODO passed: 1
t/uncat_ntax-nchar-dimensions.t (Wstat: 0 Tests: 4 Failed: 0)
TODO passed: 3
Files=35, Tests=430, 15 wallclock secs ( 0.17 usr 0.63 sys + 7.03 cusr 6.97 csys = 14.80 CPU)
Result: PASS
------------------------------
PREREQUISITES
------------------------------
Prerequisite modules loaded:
requires:
Module Need Have
---------- ---- ----
Test::More 0 0.80
------------------------------
ENVIRONMENT AND OTHER CONTEXT
------------------------------
Environment variables:
AUTOMATED_TESTING = 1
LANG = en_US.UTF-8
LD_LIBRARY_PATH = /home/david/opt/subversion/lib
PATH = .:/home/david/bin:/home/david/git/utility-scripts:/home/david/perl/current/bin:.:/home/david/bin:/home/david/git/utility-scripts:/home/david/perl/current/bin:.:/home/david/bin:/home/david/git/utility-scripts:/home/david/perl/current/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
PERL5LIB = /home/david/perl/5.8.x-threads/lib/5.8.8
PERL5OPT = -MCPAN::PERL5INC=yaml_module,YAML::Syck,tempfile,/tmp/cpan_perl5inc_ueaY.txt
PERL5_CPANPLUS_IS_RUNNING = 13192
PERL5_CPAN_IS_RUNNING = 13192
PERL5_CPAN_IS_RUNNING_IN_RECURSION = 28120,13192
PERL_CR_SMOKER_CURRENT = Bio-NEXUS-0.69b
PERL_MM_USE_DEFAULT = 1
SHELL = /bin/bash
TERM = screen
Perl special variables (and OS-specific diagnostics, for MSWin32):
$^X = /home/david/perl/5.8.x-threads/bin/perl
$UID/$EUID = 1000 / 1000
$GID = 1000 4 20 24 25 29 30 44 46 107 115 116 1000
$EGID = 1000 4 20 24 25 29 30 44 46 107 115 116 1000
Perl module toolchain versions installed:
Module Have
------------------- -------
CPAN 1.92_62
Cwd 3.2501
ExtUtils::CBuilder 0.23
ExtUtils::Command 1.13
ExtUtils::Install 1.50_01
ExtUtils::MakeMaker 6.44
ExtUtils::Manifest 1.51_01
ExtUtils::ParseXS 2.19
File::Spec 3.2501
Module::Build 0.2808
Module::Signature n/a
Test::Harness 3.10
Test::More 0.80
YAML 0.66
YAML::Syck 1.04
version 0.74
--
Summary of my perl5 (revision 5 version 8 subversion 8 patch 33819) configuration:
Platform:
osname=linux, osvers=2.6.24-16-generic, archname=i686-linux-thread-multi-64int-ld
uname='linux griffon 2.6.24-16-generic #1 smp thu apr 10 13:23:42 utc 2008 i686 gnulinux '
config_args='-de -Uversiononly -Dusedevel -Dusemorebits -Dprefix=/home/david/perl/5.8.x-threads -Dmydomain=.hyperbolic.net -Dcf_email=dagolden@cpan.org -Dperladmin=dagolden@cpan.org -Dcc=gcc -Dusethreads'
hint=recommended, useposix=true, d_sigaction=define
usethreads=define use5005threads=undef useithreads=define usemultiplicity=define
useperlio=define d_sfio=undef uselargefiles=define usesocks=undef
use64bitint=define use64bitall=undef uselongdouble=define
usemymalloc=n, bincompat5005=undef
Compiler:
cc='gcc', ccflags ='-D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64',
optimize='-O2',
cppflags='-D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -fno-strict-aliasing -pipe -I/usr/local/include'
ccversion='', gccversion='4.2.3 (Ubuntu 4.2.3-2ubuntu7)', gccosandvers=''
intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=12345678
d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=12
ivtype='long long', ivsize=8, nvtype='long double', nvsize=12, Off_t='off_t', lseeksize=8
alignbytes=4, prototype=define
Linker and Libraries:
ld='gcc', ldflags =' -L/usr/local/lib'
libpth=/usr/local/lib /lib /usr/lib
libs=-lnsl -ldl -lm -lcrypt -lutil -lpthread -lc
perllibs=-lnsl -ldl -lm -lcrypt -lutil -lpthread -lc
libc=/lib/libc-2.7.so, so=so, useshrplib=false, libperl=libperl.a
gnulibc_version='2.7'
Dynamic Linking:
dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags='-Wl,-E'
cccdlflags='-fPIC', lddlflags='-shared -O2 -L/usr/local/lib'
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